Open-source Research Tools

An R package for species identification that integrates DNA barcoding with ecological niche models.

Keywords: DNA barcoding / NBSI / Niche modeling / Species ID

• -Runs NBSI and NBSI2 workflows for barcode and environmental evidence.
• -Includes intermediate functions for information extraction, niche modeling, and pseudo-point generation.
• -Supports downstream checks such as monophyly proportion, Mantel tests, and niche PCA.

A quick-start repository with example files, a manual PDF, and bundled data for NicheBarcoding users.

Keywords: Examples / Manual / Quick start / Environmental data

• -Provides the NicheBarcodingForUsers.zip example package for fast onboarding.
• -Includes a complete example script for NBSI and NBSI2 scenarios.
• -Ships optional bioclimatic variable data for local R workspace use.

Legacy package source for the original NicheBarcoding workflow, preserved for reproducibility.

Keywords: Archive / R package / Reproducibility / NBSI

• -Keeps the initial package source and documentation accessible.
• -Useful for comparing older workflow defaults with the current package.
• -Preserves historical examples tied to the first public release.